Jmol For Mac

Mac
Jmol
Jmol three-dimensional structure rendering of streptavidin
Developer(s)Jmol development team
Initial release2001; 19 years ago
Stable release14.6.4 (October 15, 2016; 4 years ago) [±]
Preview release14.5.0 (7 November 2015; 5 years ago) [±]
Repositorysourceforge.net/projects/jmol
Written inJava
Operating systemCross-platform
PlatformSystems with Java and Web browsers without Java
Available in16 languages
Catalan, Chinese, Czech, Danish, Dutch, English, French, German, Hungarian, Indonesian, Italian, Korean, Portuguese, Spanish, Turkish, Ukrainian[1]
TypeMolecular modelling
LicenseLGPL 2.0
Websitewww.jmol.org

Jmol is a free, open source viewer of molecular structures useful for students, educators and researchers in chemistry, biochemistry and other fields dealing with molecular structure. It is cross-platform, running on Windows, Mac OS X, and Linux/Unix systems. The Jmol application is a standalone Java application that runs on the desktop. Jmol sports a clean and straightforward layout that gives users the possibility to upload files with the following formats: ADF, MDL, PDB, CIF, or XYZ. Jan 26, 2020 Jmol example/test data files in all formats accepted. Chemical file formats on Wikipedia. File formats on Open Babel. Nice description of 3D Geometry & Modeling Formats by Wolfram Mathematica. See the specific subsections. Jmol for Mac, free and safe download. Jmol latest version: The educational molecular tool. Jmol is a web browser applet that offers an open source molecule viewer that can be integrated in.

Jmol is computer software for molecular modellingchemical structures in 3-dimensions.[2] Jmol returns a 3D representation of a molecule that may be used as a teaching tool,[3] or for research e.g., in chemistry and biochemistry.It is written in the programming language Java, so it can run on the operating systems Windows, macOS, Linux, and Unix, if Java is installed. It is free and open-source software released under a GNU Lesser General Public License (LGPL) version 2.0. A standalone application and a software development kit (SDK) exist that can be integrated into other Java applications, such as Bioclipse and Taverna.

A popular feature is an applet that can be integrated into web pages to display molecules in a variety of ways.For example, molecules can be displayed as ball-and-stick models, space-filling models, ribbon diagrams, etc.[4]Jmol supports a wide range of chemical file formats, including Protein Data Bank (pdb), Crystallographic Information File (cif), MDL Molfile (mol), and Chemical Markup Language (CML). There is also a JavaScript-only (HTML5) version, JSmol, that can be used on computers with no Java.[5]

Jmol Mac Os X

The Jmol applet, among other abilities, offers an alternative to the Chime plug-in,[3] which is no longer under active development. While Jmol has many features that Chime lacks, it does not claim to reproduce all Chime functions, most notably, the Sculpt mode. Chime requires plug-in installation and Internet Explorer 6.0 or Firefox 2.0 on Microsoft Windows, or Netscape Communicator 4.8 on Mac OS 9. Jmol requires Java installation and operates on a wide variety of platforms. For example, Jmol is fully functional in Mozilla Firefox, Internet Explorer, Opera, Google Chrome, and Safari.

Jmol For MacJmol For Mac

Screenshots[edit]

Jmol For Mac
  • Crystal structure of an H/ACA box RNP from Pyrococcus furiosus.

  • Highlighting two salt bridges in hemoglobin tetramer (hemo group as sticks at bottom-right).

  • A fragment of transcription factor TFIIIA forming three consecutive zinc finger motifs, bound to a stretch of DNA.

  • Eubacterial 70S Ribosome from Thermus thermophilus.

See also[edit]

  • Chemistry Development Kit (CDK)

References[edit]

  1. ^Jmol translations
  2. ^Chen, Jim X. (2008), Springer (ed.), Guide to Graphics Software Tools, p. 471, ISBN978-1-84800-900-4
  3. ^ abHerráez, A (2006), 'Biomolecules in the Computer: Jmol to the Rescue', Biochemistry and Molecular Biology Education, 34 (4): 255–61, doi:10.1002/bmb.2006.494034042644, PMID21638687, S2CID36319720
  4. ^Herráez, A (2007), Lulu (ed.), How to Use Jmol to Study and Present Molecular Structures, Volume 1, p. 21, ISBN978-1-84799-259-8
  5. ^'JSmol'. Archived from the original on 2018-01-01. Retrieved 2015-11-02.

External links[edit]

Wikimedia Commons has media related to Jmol.
  • Official website
    • Wiki with listings of websites, wikis, and moodles
  • Willighagen, Egon; Howard, Miguel (June 2007). 'Fast and Scriptable Molecular Graphics in Web Browsers without Java3D'. Nature Precedings. doi:10.1038/npre.2007.50.1.
Retrieved from 'https://en.wikipedia.org/w/index.php?title=Jmol&oldid=991654034'

Jmol is a free and open source 3D viewer software app filed under 3d design and made available by Egon Willighagen for Windows.

The review for Jmol has not been completed yet, but it was tested by an editor here on a PC.

Jmol For Mac

If you would like to submit a review of this software download, we welcome your input and encourage you to submit us something!

Molecule viewer for chemistry, biochemistry, physics and materials science

Jmol For Mac Keyboard


Jmol For Mac Download

Jmol is a Java based application and an applet for displaying 3D chemical information. Jmol is a molecule viewer for students, educators, and researchers in chemistry, biochemistry, physics, and materials science.

Features include reading a variety of file types, including PyMOL session files and output from quantum chemistry programs, file writing (including JPG, PNG, PNGJ (PNG ZIP), and ZIP formats), and animation of multi-frame files and computed normal modes from quantum programs, surfaces, translucency and more.

Jmol on 32-bit and 64-bit PCs

This download is licensed as freeware for the Windows (32-bit and 64-bit) operating system on a laptop or desktop PC from 3d design without restrictions. Jmol 14.31.18 is available to all software users as a free download for Windows 10 PCs but also without a hitch on Windows 7 and Windows 8.

Jmol mac not working

Compatibility with this 3D viewer software may vary, but will generally run fine under Microsoft Windows 10, Windows 8, Windows 8.1, Windows 7, Windows Vista and Windows XP on either a 32-bit or 64-bit setup. A separate x64 version may be available from Egon Willighagen.

Filed under:
  1. Jmol Download
  2. Freeware 3D Design
  3. Open source and GPL software
  4. Portable Software
  5. Major release: Jmol 14.31